Category Archives: General

A New Page – What is Science 2.0?

Well, Science 2.0 must be the next full release after Science 1.5.b13, right? Not quite. It takes its lead from applying Web 2.0 approaches to scientific research. So, what is Web 2.0?

In 2005, Tim O’Reilly described in detail what he meant by Web 2.0. Since then, there has been a lot of discussion on just what this means, if anything. So, I am going to add my own two bits to the mix. There really are not many technical differences between Web 1.0 and 2.0. The differences come from how they are used, and how usable they are.

Web 1.0 is static. Web 2.0 is dynamic.

As mentioned in the Wikipedia article on Web 2.0, Web 1.0 was about displaying information. Web 2.0 is about conversations, about participation in the flow of information.

Web 2.0 uses many new approaches for dealing with information including wikis, weblogs, syndication, aggregators, RSS, podcasts, forums and mashups. These often require the active participation of users. They have been used to create hugely popular social media sites, such as Facebook and YouTube, where the very content seen by all is created totally by the users. User-generated content.
Continue reading A New Page – What is Science 2.0?

Paul’s Principles of Web 2.0

Spider by aussiegall
Web 2.0: Building the New Library
[Via Ariadne]

Paul Miller wrote this over 2 years ago but it amply describes the effects of new approaches will have on an area that lives by dispersing information. It is not the technology that will make a difference. It is an attitude, one that is almost as old as humankind.

Sharing helps the entire team, tribe or town. The collective intelligence of the group is only strong when the umber of information chokepoints is low.

Paul’s Principles of Web 2.0, as discussed here, still apply in almost any endeavor that must deal with information to succeed. Here they are:

  • Web 2.0 presages a freeing of data, allowing it to be exposed, discovered and manipulated in a variety of ways distinct from the purpose of the application originally used to gain access.
  • Web 2.0 permits the building of virtual applications, drawing data and functionality from a number of different sources as appropriate.
  • Web 2.0 is participative.
  • Web 2.0 applications work for the user.
  • Web 2.0 applications are modular, with developers and users able to pick and choose from a set of interoperating components in order to build something that meets their needs.
  • Web 2.0 is about sharing: code, content, ideas.
  • Web 2.0 is about communication and facilitating community.
  • Web 2.0 is about remix.
  • Web 2.0 is smart.
  • Web 2.0 opens up the Long Tail.
  • Web 2.0 is built upon Trust.

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Science in the open

University by jeffpearce
Progress toward Public Access to Science:
[Via PLoS Biology: New Articles]

PLoS Chairman of the Board Harold Varmus applauds the newly enacted NIH public access policy as a positive step toward ensuring greater access to and better use of the scientific literature.

This very nicely discusses some of the recent changes that are making Open Access to scientific information a going concern. Anyone receiving money from NIH has to deposit the accepted manuscripts into PubMed Central and allow freely available viewing within 12 months.

He also mentions the continuing problem of copyright. Many journals require the authors to turn over all rights to the journal in order to have the paper published. This is becoming a problem in the Web 2.0 world, since the concerns of the author do not often match those of the publisher.

As Varmus writes:

Finally, unless authors modify their copyright agreements with journals before publication—something they are urged to do—journals will continue to retain inappropriate control over the use of their articles, which is currently confined largely to reading online for most articles in PMC.

Harvard has recently addressed this. Faculty members must grant a non-exclusive license to the University for it to post on a website it maintains, one that is open and free. Faculty can opt out of this on a case by case basis if the journal will not permit this.
Varmus comments:

Moreover, the nuisance of writing to the Provost every time a desired journal refuses to conform to the Harvard policy may cause faculty members to rethink their choice of venue, thereby minimizing use of the “opt-out” option.

The journals make their reputation based on the reputations of its author scientists. If a journal has a restrictive copyright policy, these scientists may go elsewhere, putting pressure on the journal to adopt more open access.

This story is not over yet. But it has the potential to revolutionize scientific publishing. Stay tuned.

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Teaching science

structure by Vik Nanda

Rethinking Outreach: Teaching the Process of Science through Modeling:
[Via PLoS Biology: New Articles]

How can we get high school students interested in science? Here is a program that matches students with researchers, with the purpose of building a physical model of the protein being investigated in the lab.
What an outstanding idea! Not only did these students learn a great deal about how research is actually done but they also were instrumental in helping the researcher have some of the tools he needed.

These sorts of interactions will always be needed. Humans like to interact personally with others. But, Web 2.0 technologies can make it easier for these sorts of interactions to take place. Meetup is a great example of this.

There are already hints that scientific meetings may take a similar path. Again, not to replace the conferences already taking place but as an adjunct.

Update: Of course, Web 2.0 approaches can also expand the reach of teaching and communications. A great example was the recent EDUCAUSE Learning Initiative Online Focus Session.

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Slides gone bad

This is pretty hard to believe. 65 slides! And there are so many things wrong with each slide: horrible colors, too much clutter on slides, fonts too small. Just to name a few.

Each slide would have to take several minutes to get through, by which time everyone is zoned out and does not get the message. And, with no context, the slides can not be understood by anyone who was not present.

These are nice examples of what not to do.

Your moment of (slideument) Zen:
[Via Presentation Zen]

Coke_ppt_3

Coke3_3 Coke_ppt2_3

Three sample slides for your contemplation courtesy of a 65-slide PowerPoint deck from the world’s biggest brand.

Source: Coca-Cola Japan. Go to the site (investor relations page) and download the presentation slides (1.5MB pdf) and enjoy the journey yourself. The slide deck is ‘the real thing.’ H/T Samuli.

What’s a Slideument?

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